Vol. 28 (2026): Publicación continua
Original articles

Meteorological Frost Prediction Using Ensemble Machine Learning Models With a Multi-Horizon Approach for Agroclimatic Early Warning in the Puno Altiplano, 2015–2024

Romel Gonzalo Quispe-Valero
Departamento de Estadística e Informática, Facultad de Ingeniería Estadística e Informática, Universidad Nacional del Altiplano, Puno, Perú
Jorge Luis Flores-Quispe
Universidad Nacional del Altiplano, Puno, Perú

Published 2026-08-28

Keywords

  • machine learning,
  • weather forecasting,
  • frost,
  • Peru,
  • database

How to Cite

Quispe-Valero, R. G., & Flores-Quispe, J. L. (2026). Meteorological Frost Prediction Using Ensemble Machine Learning Models With a Multi-Horizon Approach for Agroclimatic Early Warning in the Puno Altiplano, 2015–2024. Revista De Investigaciones Altoandinas - Journal of High Andean Research, 28, e28849. https://doi.org/10.18271/ria.2026.849

Abstract

The predictive capacity of nine machine learning algorithms was evaluated for forecasting meteorological frosts at six weather stations in the Puno region (Peru) across three different time horizons (24, 48, and 72 h). In the second step, climate reanalysis data (ERA5-Land using the Open-Meteo API) from the period 2015–2024 were consolidated into 526,032 hourly records corresponding to 21,918 daily observations from up to 57 agroclimatic predictors. Frosts showed a regional average prevalence of 17.4%, exhibiting marked spatial heterogeneity ranging from 31.3% in Ilave to 7.7% in Puno, highlighting the regulatory role of Lake Titicaca’s temperature. A five-fold stratified cross-validation was performed to estimate the AUC-ROC, F1-score, accuracy, sensitivity, and Cohen’s kappa for model performance. The best overall performance was obtained using the voting ensemble, with an AUC-ROC of 0.957 and an F1-score of 0.744 at 24 h, corresponding to values of 0.913 and 0.656 at a 72 h cutoff time, respectively. Threshold optimization led to a regional F1-score improvement of +0.025 compared to the conventional threshold (t = 0.50). SHAP value analysis revealed that the driver with the greatest impact was the 3-day moving average minimum temperature (mean |SHAP| = 1.274). The developed model represents an objective early agroclimatic warning tool for crops in the Andean highlands.

References

  1. Arias, P. A., Garreaud, R., Poveda, G., Espinoza, J. C., Molina-Carpio, J., Masiokas, M., Viale, M., Scaff, L., & van Oevelen, P. J. (2021). Hydroclimate of the Andes Part II: Hydroclimate variability and sub-continental patterns. Frontiers in Earth Science, 8, 505467. https://doi.org/10.3389/feart.2020.505467
  2. Baño-Medina, J., Manzanas, R., & Gutiérrez, J. M. (2021). On the suitability of deep convolutional neural networks for continental-wide downscaling of climate change projections. Climate Dynamics, 57(11-12), 2941-2951. https://doi.org/10.1007/s00382-021-05847-0
  3. Benique-Olivera, E., & Ojeda-Tito, A. (2024). Impacto del cambio climático en la producción y rendimiento de quinua (Chenopodium quinoa Willd) en la provincia de Azángaro, región del Altiplano-Puno, Perú. Revista de Investigaciones Altoandinas, 26(3), 154-160. https://doi.org/10.18271/ria.2024.618
  4. Bentéjac, C., Csörgő, A., & Martínez-Muñoz, G. (2021). A comparative analysis of gradient boosting algorithms. Artificial Intelligence Review, 54(3), 1937-1967. https://doi.org/10.1007/s10462-020-09896-5
  5. Bi, K., Xie, L., Zhang, H., Chen, X., Gu, X., & Tian, Q. (2023). Accurate medium-range global weather forecasting with 3D neural networks. Nature, 619, 533-538. https://doi.org/10.1038/s41586-023-06185-3
  6. Chen, H., Covert, I. C., Lundberg, S. M., & Lee, S.-I. (2023). Algorithms to estimate Shapley value feature attributions. Nature Machine Intelligence, 5(6), 590-601. https://doi.org/10.1038/s42256-023-00657-x
  7. Dewitte, S., Cornelis, J. P., Müller, R., & Munteanu, A. (2021). Artificial intelligence revolutionises weather forecast, climate monitoring and decadal prediction. Remote Sensing, 13(16), 3209. https://doi.org/10.3390/rs13163209
  8. Díaz, L. B., & Vera, C. S. (2024). Extreme indices of temperature and precipitation in South America: trends and intercomparison of regional climate models. Climate Dynamics, 62(2), 1421-1439. https://doi.org/10.1007/s00382-022-06598-2
  9. Diedrichsen, E., Schmidhalter, U., & Trevisan, R. G. (2023). Prediction of frost events using machine learning and deep learning for smart agriculture. Computers and Electronics in Agriculture, 209, 107815. https://doi.org/10.1016/j.compag.2023.107815
  10. Grisel, O., Mueller, A., Lars, Gramfort, A., Louppe, G., Fan, T. J., Prettenhofer, P., Blondel, M., Niculae, V., Nothman, J., Joly, A., Lemaitre, G., Estève, L., Vanderplas, J., du Boisberranger, J., Kumar, M., Qin, H., Hug, N., Varoquaux, N., . . . Lorentzen, C. (2024). scikit-learn/scikit-learn: Scikit-learn 1.4.0 (Versión 1.4.0) [Software de computación]. Zenodo. https://doi.org/10.5281/zenodo.10532824
  11. Huerta, A., Aybar, C., & Lavado-Casimiro, W. (2023). PISCO temperature v1.2: a spatiotemporal reconstruction of air temperature for Peru. Earth System Science Data, 15(1), 345-365. https://doi.org/10.5194/essd-15-345-2023
  12. Junquas, C., Espinoza, J. C., Segura, H., Lucas-Picher, P., Boudin, M., Condom, T., & Lebel, T. (2022). Regional climate modeling of the diurnal cycle of precipitation and associated atmospheric circulation patterns over an Andean glacier region. Climate Dynamics, 58(9-10), 2873-2895. https://doi.org/10.1007/s00382-021-06079-y
  13. Kaur, H., Pannu, H. S., & Malhi, A. K. (2022). A systematic review on imbalanced data challenges in machine learning: Applications and solutions. ACM Computing Surveys, 52(4), 1-36. https://doi.org/10.1145/3505244
  14. Lam, R., Sanchez-Gonzalez, A., Willson, M., Wirnsberger, P., Fortunato, M., Alet, F., Ravuri, S., Ewalds, T., Eaton-Rosen, Z., Hu, W., Merose, A., Hoyer, S., Holland, G., Vinyals, O., Stott, J., Pritzel, A., Mohamed, S., & Battaglia, P. (2023). Learning skillful medium-range global weather forecasting. Science, 382(6677), 1416–1421. https://doi.org/10.1126/science.adi2336
  15. Lira, H., Martí, L., & Sanchez-Pi, N. (2022). A graph neural network with spatio-temporal attention for multi-sources time series data: An application to frost forecast. Sensors, 22(4), 1486. https://doi.org/10.3390/s22041486
  16. MINAGRI. (2021). Plan de gestión de riesgo agrario frente a heladas y friaje 2021-2030. Ministerio de Agricultura y Riego del Perú. https://www.midagri.gob.pe
  17. Muñoz-Sabater, J., Dutra, E., Agustí-Panareda, A., Albergel, C., Arduini, G., Balsamo, G., Boussetta, S., Choulga, M., Harrigan, S., Hersbach, H., Martens, B., Miralles, D. G., Piles, M., Rodríguez-Fernández, N. J., Zsoter, E., Buontempo, C., & Thépaut, J.-N. (2021). ERA5-Land: A state-of-the-art global reanalysis dataset for land applications. Earth System Science Data, 13(9), 4349–4383. https://doi.org/10.5194/essd-13-4349-2021
  18. Nguyen, T., Shah, R., Sharma, P., Vu, T., Nguyen, H., Burke, J., Bonfils, C., Entekhabi, D., & Bhattacharya, A. (2023). ClimaX: A foundation model for weather and climate. Proceedings of the 40th International Conference on Machine Learning (ICML 2023), PMLR 202, 25904-25938. https://doi.org/10.48550/arXiv.2301.10343
  19. Quispe-Mamani, J. F., Yucra-Quispe, L. F., Loza-Murguia, M., & Chipana-Cutipa, E. (2023). Climate variability and agricultural production in the Peruvian Altiplano: impacts on food security. Agriculture, 13(4), 847. https://doi.org/10.3390/agriculture13040847
  20. Rasp, S., Dueben, P. D., Scher, S., Weyn, J. A., Mouatadid, S., & Thuerey, N. (2024). WeatherBench 2: A benchmark for the next generation of data-driven global weather models. Journal of Advances in Modeling Earth Systems, 16(1), e2023MS004019. https://doi.org/10.1029/2023MS004019
  21. Rozante, J. R., Silveira Coelho, C. A., Silveira Pires, L., & Pillosu, F. M. (2023). Improved frost forecast using machine learning. Artificial Intelligence in Geosciences, 4, 100058. https://doi.org/10.1016/j.aiig.2023.10.001
  22. Schultz, M. G., Betancourt, C., Gong, B., Kleinert, F., Langguth, M., Leufen, L. H., Mozaffari, A., & Stadtler, S. (2021). Can deep learning beat numerical weather prediction? Philosophical Transactions of the Royal Society A, 379(2194), 20200097. https://doi.org/10.1098/rsta.2020.0097
  23. SENAMHI. (2023). Atlas de heladas del Perú. Servicio Nacional de Meteorología e Hidrología del Perú. https://www.senamhi.gob.pe
  24. Zippenfenig, P. (2023). Open-Meteo.com Weather API [software]. Zenodo. https://doi.org/10.5281/zenodo.7970649